Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs77344981 | chr19:6692145 | C/T | 0.000276 | 213 | 16.47 | 13.67 | 6.53 | KM Plot |
| KIRP | rs77363306 | chr10:74953412 | C/G | 6.41E-12 | 212 | 16.73 | 11.3 | 5.6 | KM Plot |
| KIRP | rs77374608 | chr10:63437753 | G/T | 0 | 214 | 18.02 | 6.2 | 3.38 | KM Plot |
| KIRP | rs77374642 | chr8:26029325 | G/A | 8.35E-7 | 212 | 16.97 | 13.1 | 9.77 | KM Plot |
| KIRP | rs77378932 | chr10:63488275 | T/C | 0 | 213 | 18.25 | 6.83 | 3.38 | KM Plot |
| KIRP | rs77408251 | chr11:22360432 | T/C | 6.53E-6 | 207 | 14.83 | 18.03 | 4.07 | KM Plot |
| KIRP | rs77448323 | chr11:34774834 | G/T | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs7751878 | chr6:26987723 | T/G | 2.66E-6 | 214 | 4.58 | 11.63 | 16.97 | KM Plot |
| KIRP | rs77535550 | chr11:34925752 | T/C | 0 | 214 | 15.33 | 17 | 3.83 | KM Plot |
| KIRP | rs7758436 | chr6:53554746 | A/G | 8.97E-13 | 214 | 5.57 | 12.1 | 16.93 | KM Plot |
| KIRP | rs77644333 | chr9:112120508 | C/G | 0 | 206 | 16.97 | 15.9 | 1.3 | KM Plot |
| KIRP | rs7766501 | chr6:10696677 | C/T | 1.69E-8 | 214 | 16.73 | 13.03 | 1.9 | KM Plot |
| KIRP | rs7768422 | chr6:110796405 | C/T | 1.15E-5 | 214 | 5.57 | 12.38 | 18.03 | KM Plot |
| KIRP | rs77783962 | chr14:59846441 | C/G | 0.000228 | 209 | 14.83 | 19.4 | 11.2 | KM Plot |
| KIRP | rs77785715 | chr11:34771805 | G/C | 0 | 214 | 16.43 | 16.43 | 3.83 | KM Plot |